2023 – Page 3 – Seyfried Lab

Batch Correction and Harmonization of -Omics Datasets with a Tunable Median Polish of Ratio.

Dammer EB, Seyfried NT, Johnson ECB. Batch Correction and Harmonization of -Omics Datasets with a Tunable Median Polish of Ratio. Front Syst Biol. 2023;3. Epub 2023/05/01. doi: 10.3389/fsysb.2023.1092341. PubMed PMID: 37122388; PMCID: PMC10137904.

RGS14 limits seizure-induced mitochondrial oxidative stress and pathology in hippocampus.

Harbin NH, Lustberg DJ, Hurst C, Pare JF, Crotty KM, Waters AL, Yeligar SM, Smith Y, Seyfried NT, Weinshenker D, Hepler JR. RGS14 limits seizure-induced mitochondrial oxidative stress and pathology in hippocampus. Neurobiol Dis. 2023 Jun 1:181:106128. Epub 2023/04/17. doi: 10.1016/j.nbd.2023.106128.

Cellular Proteomic Profiling Using Proximity Labeling by TurboID-NES in Microglial and Neuronal Cell Lines.

Sunna S, Bowen C, Zeng H, Rayaprolu S, Kumar P, Bagchi P, Dammer EB, Guo Q, Duong DM, Bitarafan S, Natu A, Wood L, Seyfried NT, Rangaraju S. Cellular Proteomic Profiling Using Proximity Labeling by TurboID-NES in Microglial and Neuronal Cell Lines. Mol Cell Proteomics. 2023;22(6):100546. Epub 2023/04/16. doi: 10.1016/j.mcpro.2023.100546. PubMed PMID: 37061046; PMCID: PMC10205547.

Integrated Proteomics to Understand the Role of Neuritin (NRN1) as a Mediator of Cognitive Resilience to Alzheimer’s Disease. Mol Cell Proteomics.

Hurst C, Pugh DA, Abreha MH, Duong DM, Dammer EB, Bennett DA, Herskowitz JH, Seyfried NT. Integrated Proteomics to Understand the Role of Neuritin (NRN1) as a Mediator of Cognitive Resilience to Alzheimer’s Disease. Mol Cell Proteomics. 2023;22(5):100542. Epub 2023/04/07. doi: 10.1016/j.mcpro.2023.100542. PubMed PMID: 37024090; PMCID: PMC10233303.

Proteome-Wide Discovery of Cortical Proteins That May Provide Motor Resilience to Offset the Negative Effects of Pathologies in Older Adults.

Buchman AS, Yu L, Klein HU, Zammit AR, Oveisgharan S, Grodstein F, Tasaki S, Levey AI, Seyfried NT, Bennett DA. Proteome-Wide Discovery of Cortical Proteins That May Provide Motor Resilience to Offset the Negative Effects of Pathologies in Older Adults. J Gerontol A Biol Sci Med Sci. 2023;78(3):494-503. Epub 2022/05/06. doi: 10.1093/gerona/glac105.

Pathogenesis of Alzheimer’s disease: Involvement of the choroid plexus.

Čarna M, Onyango IG, Katina S, Holub D, Novotny JS, Nezvedova M, Jha D, Nedelska Z, Lacovich V, Vyvere TV, Houbrechts R, Garcia-Mansfield K, Sharma R, David-Dirgo V, Vyhnalek M, Texlova K, Chaves H, Bakkar N, Pertierra L, Vinkler M, Markova H, Laczo J, Sheardova K, Hortova-Kohoutkova M, Frič J, Forte G, Kaňovsky P, Belaškova […]

Machine Learning Selection of Most Predictive Brain Proteins Suggests Role of Sugar Metabolism in Alzheimer’s Disease.

Tandon R, Levey AI, Lah JJ, Seyfried NT, Mitchell CS. Machine Learning Selection of Most Predictive Brain Proteins Suggests Role of Sugar Metabolism in Alzheimer’s Disease. J Alzheimers Dis. 2023;92(2):411-24. Epub 2023/02/14. doi: 10.3233/jad-220683. PubMed PMID: 36776048; PMCID: PMC10041447.